Our Publications
Scientific papers written by Cytocast scientists introducing the fundamental science behind our product.
- A. Ecker, G. Szabó, J. Szalma, E. Fichó, I. Reguly, A. Csikász-Nagy: 'Digital Twin Approaches for Interpretable Side Effect Prediction in Drug Discovery', Drug Discovery Today, vol. 31, ii:3, (2026)
- R. Fekete, A. Simats, E. Bíró, B. Pósfai, Cs. Cserép, A. D. Schwarcz, E. Szabadits, Zs. Környei, K. Tóth, E. Fichó, J. Szalma, et al. 'Microglia dysfunction, neurovascular inflammation and focal neuropathologies are linked to IL-1- and IL-6-related systemic inflammation in COVID-19', Nature Neuroscience, 28 : 3 pp. 558-576. , 19 p., (2025)
- A. Csikász-Nagy, E. Fichó, S. Noto, and I. Reguly, ‘Computational tools to predict context-specific protein complexes’, Current Opinion in Structural Biology, vol. 88. Elsevier BV, p. 102883, Oct. (2024)
- M. Miski, Á. Weber, K. Fekete-Molnár, B. M. Keömley-Horváth, A. Csikász-Nagy, and Z. Gáspári, ‘Simulated complexes formed from a set of postsynaptic proteins suggest a localised effect of a hypomorphic Shank mutation’, BMC Neuroscience, vol. 25, no. 1. Springer Science and Business Media LLC, Jul. 06, 2024
- F. Reali, A. Csikász-Nagy and G Selvaggio: Editorial: ’Use of quantitative systems pharmacology pipelines to bridge in vitro and in vivo results in drug discovery’, Front. Syst. Biol. 3:1291610, (2023)
- Miski, Marcell, Bence Márk Keömley-Horváth, Dorina Rákóczi Megyeriné, Attila Csikász-Nagy, and Zoltán Gáspári. "Diversity of synaptic protein complexes as a function of the abundance of their constituent proteins: A modeling approach." PLOS Computational Biology 18, no. 1 (2022)
- Rizzetto, Simone, and Attila Csikász-Nagy. "Toward large-scale computational prediction of protein complexes." Computational Cell Biology: Methods and Protocols (2018): 271-295.
- Rizzetto, Simone, Petros Moyseos, Bianca Baldacci, Corrado Priami, and Attila Csikász-Nagy. "Context-dependent prediction of protein complexes by SiComPre." NPJ Systems Biology and Applications 4, no. 1 (2018): 37.
- Rizzetto, Simone, Corrado Priami, and Attila Csikász-Nagy. "Qualitative and quantitative protein complex prediction through proteome-wide simulations." PLOS Computational Biology 11, no. 10 (2015): e1004424.